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Noninvasive physical monitoring of molecular interactions in regulation of gene expression

Noninvasive physical monitoring of molecular interactions in regulation of gene expression

Provider: Grantová agentura České republiky (GA ČR)
Principal recipient: Univerzita Karlova / Matematicko-fyzikální fakulta
Co-investigator:
From: 1. January 2005
To: 31. December 2007
Project number:

Advanced optical methods capable to diagnose sensitively biomolecular interactions in small quantities without the interaction site labeling, will be developed and applied to study of nucleic acid – protein interactions, in particular those playing important role in regulation of gene expression and/or in “antisense” therapy. Formation, structure and biochemical activity of enzyme – nucleic acid complexes in respect to the base sequence and/or nucleotide modification will be studied on selected cleavageand regulation enzymes. Methodological developments will comprise (i) technical and mathematical solution for precise Raman spectroscopy in nmol quantities, (ii) construction of high-resolution surface plasmon resonance sensor system with up to eight real-time observation channels, (iii) design of complex biomolecular interaction models considering effect of hydrodynamic conditions, (iv) preparation of structurally diverse sugar-phosphate backbone modified oligodeoxynucleotides.

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