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Computational Molecular Modelling Research Assistant

Computational Molecular Modelling Research Assistant

We are seeking a motivated Research Assistant to join our Bioelectrodynamics research team, at the Institute of Photonics and Electronics, Czech Academy of Sciences in Prague. 

The position will focus on supporting high-performance computing (HPC) infrastructure and molecular dynamics simulations in the field of computational biophysics. The role may also serve as a pathway towards starting a PhD in our group for interested and qualified candidates. 

Key Responsibilities:

  • Maintain and manage the group’s computer cluster and workstations. 
  • Install, configure, and update Linux operating systems on desktops and servers. 
  • Install and manage scientific software packages for molecular modeling and simulations.
  • Prepare, submit, and monitor molecular dynamics simulation jobs on local and remote HPC systems. 
  • Provide technical support and troubleshooting for research staff. 

Qualifications:

  • Completed or pursuing bachelor’s or master’s degree in computer science, Physics, Chemistry, Bioinformatics, or related field. 
  • Strong knowledge of Linux system administration (installation, configuration, package management). 
  • Familiarity with HPC clusters, job schedulers (SLURM, PBS, etc.), and remote access tools (SSH, SCP, etc.). 
  • Experience with molecular dynamics simulation packages (e.g., GROMACS, AMBER, NAMD, CHARMM) is a strong advantage but not necessary. 
  • Ability to work independently as well as collaboratively within a research team. 

 We Offer:

  • An opportunity to contribute to cutting-edge bioelectrodynamics research, see bioed.ufe.cz. 
  • Hands-on experience with HPC systems and molecular modeling workflows. 
  • A collaborative and international research environment. 
  • Possibility of advancing to a PhD position in our team. 
  • Part time work possibility (0.5-1 FTE) and flexible working hours
  • Opportunities for personal growth and gaining new expertise in the field 
  • 5 weeks of vacation and 3 sick day leave yearly (at full-time employment) 
  • A friendly and supportive team of colleagues 
  • A wide range of benefits (meal allowance, contributions to pension or life insurance, support for sports activities – Multisport card) 
  • Access to language courses, professional training, and support for further education 

Application Process: 

Interested candidates should submit: 

  • A CV/resume 
  • A brief statement of interest (max 1 page) 
  • Contact information for references 

📩 To send your application follow this form: https://forms.cloud.microsoft/e/K5LXFXQz23  

📅 Application deadline: 7th November 

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