Bioelektrodynamika: Publikace

Publikace 2025

P. Kůrka, D. Havelka, M. Cifra, "Broadband Extraction of Sample Permittivity From Microwave Planar Transmission Lines", IEEE Transactions on Microwave Theory and Techniques Vol. 73, No. 9 (2025) doi:https://doi.org/10.1109/TMTT.2025.3557666

Publikace 2024

M. Bereta, M. Teplan, T. Zakar, H. Vuviet, M. Cifra and D.E. Chafai, "Biological autoluminescence enables effective monitoring of yeast cell electroporation", Biotechnology Journal 19 (4), 2300475 (2024) doi:10.1002/biot.202300475

S.K. Pandey and M. Cifra, "Tubulin Vibration Modes Are in the Subterahertz Range, and Their Electromagnetic Absorption Is Affected by Water", Journal of Physical Chemistry Letters 15 (32), 8334-8342 (2024) doi:10.1021/acs.jpclett.4c01553

K. Červinková, P. Vahalová, M. Poplová, T. Zakar, D. Havelka, M. Paidar, V. Kolivoška, and M. Cifra, "Modulation of pulsed electric field induced oxidative processes in protein solutions by pro- and antioxidants sensed by biochemiluminescence", Scientific Reports 14 (1), 22649 (2024) doi:10.1038/s41598-024-71626-6

Publikace 2023

J. Vacek, M. Zatloukalová, V. Dorčák, M. Cifra, Z. Futera and V. Ostatná, "Electrochemistry in sensing of molecular interactions of proteins and their behavior in an electric field", Microchimica Acta. 190(11), 442 (2023) doi:10.1007/s00604-023-05999-2

M. Poplová, A. Prasad, E.P.A. van Wijk, P. Pospíšil and M. Cifra, "Biological Auto(chemi)luminescence Imaging of Oxidative Processes in Human Skin", Analytical Chemistry. 95(40), 14853-14860 (2023) doi:10.1021/acs.analchem.3c01566

P. Vahalová, D. Havelka, E. Vaněčková, T. Zakar, V. Kolivoška and M. Cifra, "Biochemiluminescence sensing of protein oxidation by reactive oxygen species generated by pulsed electric field", Sensors and Actuators B - Chemical. 385(15 Jun ), 133676 (2023) doi:10.1016/j.snb.2023.133676

J. Průša and M. Cifra, "Electro-detachment of kinesin motor domain from microtubule in silico", Computational and Structural Biotechnology Journal. 21(Feb), 1349-1361 (2023) doi:10.1016/j.csbj.2023.01.018

P. Vahalová and M. Cifra, "Biological autoluminescence as a perturbance-free method for monitoring oxidation in biosystems", Progress in Biophysics & Molecular Biology. 177(Jan), 80-108 (2023) doi:10.1016/j.pbiomolbio.2022.10.009

Publikace 2022

D. Havelka, I. Zhernov, M. Teplan, Z. Lánský, D. Chafai and M. Cifra, "Lab-on-chip microscope platform for electro-manipulation of a dense microtubules network", Scientific Reports. 12(1), 2462 (2022) doi:10.1038/s41598-022-06255-y

Publikace 2021

P. Vahalová, K. Červinková and M. Cifra, "Biological autoluminescence for assessing oxidative processes in yeast cell cultures", Scientific Reports. 11(1), 10852 (2021) doi:10.1038/s41598-021-89753-9

J. Průša, A. Taha Ayoub, D. Chafai, D. Havelka and M. Cifra, "Electro-opening of a microtubule lattice in silico", Computational and Structural Biotechnology Journal. 19(March), 1488-1496 (2021) doi:10.1016/j.csbj.2021.02.007

E.R. Hunting, P.F. de Arroyabe Hernaez, S.J. England, K. Kourtidis, K. Koh, K.A. Nicoll, R.G. Harrison, K. Manser, C. Price, S. Dragovic, M. Cifra, A. Odzimek and D. Robert, "Challenges in coupling atmospheric electricity with biological systems", International Journal of Biometeorology. 65(1), 45-58 (2021) doi:10.1007/s00484-020-01960-7

P. Fdez-Arroyabe, K. Kourtidis, C. Haldoupis, S. Savoska, J. Matthews, L.M. Mir, P. Kassomenos, M. Cifra, S. Barbosa, XM. Chen, S. Dragovic, C. Consoulas, E.R. Hunting, D. Robert, O. van der Velde, F. Apollonio, A. Odzimek, A. Chilingarian, D. Roye, H. Mkrtchyan, C. Price, J. Bór, Ch. Oikonomou, M.V. Birsan, B. Crespo-Facorro, M. Djordjevic, C. Salcines, A. Lopez-Jimenez, R.V. Donner, M. Vana, J.O.P. Pedersen, M. Vorenhout and M. Rycroft, "Glossary on atmospheric electricity and its effects on biology", International Journal of Biometeorology. 65(1), 47239 (2021) doi:10.1007/s00484-020-02013-9

S. Savoska, P. Fdez-Arroyabe, M. Cifra, K. Kourtidis, E. Rozanov, K.A. Nicoll, S. Dragovic and L.M. Mir, "Toward the creation of an ontology for the coupling of atmospheric electricity with biological systems", International Journal of Biometeorology. 65(1), 31-44 (2021) doi:10.1007/s00484-020-02051-3

O. Krivosudský, D. Havelka, D. Chafai and M. Cifra, "Microfluidic on-chip microwave sensing of the self-assembly state of tubulin", Sensors and Actuators B - Chemical. 328(1 Feb), 129068 (2021) doi:10.1016/j.snb.2020.129068

M. Bereta, M. Teplan, D. Chafai, R. Radil and M. Cifra, "Biological autoluminescence as a noninvasive monitoring tool for chemical and physical modulation of oxidation in yeast cell culture", Scientific Reports. 11(1), 328 (2021) doi:10.1038/s41598-020-79668-2

M. Cifra, F. Apollonio, M. Liberti, T. Garcia-Sanchez and L.M. Mir, "Possible molecular and cellular mechanisms at the basis of atmospheric electromagnetic field bioeffects", International Journal of Biometeorology. 65(1), 59-67 (2021) doi:10.1007/s00484-020-01885-1

J. Riancho, J.R. Sanchez de la Torre, L. Paz-Fajardo, C. Limia, A. Santurtun, M. Cifra, K. Kourtidis and P. Fdez-Arroyabe, "The role of magnetic fields in neurodegenerative diseases", International Journal of Biometeorology. 65(1), 107-117 (2021) doi:10.1007/s00484-020-01896-y

Publikace 2020

S. Vajravel, H. Laczkó-Dobos, N. Petrova, E. Herman, T. Kovács, T. Zakar, S. J. Todinova, S. Taneva, L. Kovacs, Z. Gombos, T. Toth and S. Krumova, "Phycobilisome integrity and functionality in lipid unsaturation and xanthophyll mutants in Synechocystis", Photosynthesis Research. 145(2), 179-188 (2020) doi:10.1007/s11120-020-00776-1

J. Průša and M. Cifra, "Dataset of molecular dynamics simulation trajectories of amino-acid solutions with various force fields; water models and modified force field parameters", Data in Brief. 30(June), 105483 (2020) doi:10.1016/j.dib.2020.105483

J. Průša and M. Cifra, "Dependence of amino-acid dielectric relaxation on solute-water interaction: Molecular dynamics study", Journal of Molecular Liquids. 303(Apr), 112613 (2020) doi:10.1016/j.molliq.2020.112613

H. Sardarabadi, D. Chafai, F. Gheybi, P. Sasanpour, H. Rafii-Tabar and M. Cifra, "Enhancement of the biological autoluminescence by mito-liposomal gold nanoparticle nanocarriers", Journal of Photochemistry and Photobiology. B - Biology Section. 204(March), 111812 (2020) doi:10.1016/j.jphotobiol.2020.111812

D. Chafai, F. Vostárek, E. Dráberová, D. Havelka, D. Arnaud-Cormos, Ph. Leveque, J. Janáček, L. Kubínová, M. Cifra and P. Dráber, "Microtubule Cytoskeleton Remodeling by Nanosecond Pulsed Electric Fields", Advanced Biosystems. 4(7), 2000070 (2020) doi:10.1002/adbi.202000070

D. Havelka, D. Chafai, O. Krivosudský, A. Klebanovych, F. Vostárek, L. Kubínová, P. Dráber and M. Cifra, "Nanosecond Pulsed Electric Field Lab-on-Chip Integrated in Super-Resolution Microscope for Cytoskeleton Imaging", Advanced Materials Technologies. 5(3), 1900669 (2020) doi:10.1002/admt.201900669

Publikace 2019

J. Průša and M. Cifra, "Molecular dynamics simulation of the nanosecond pulsed electric field effect on kinesin nanomotor", Scientific Reports. 9(1), 19721 (2019) doi:10.1038/s41598-019-56052-3

M. Dlask, J. Kukal, M. Poplová, P. Sovka and M. Cifra, "Short-time fractal analysis of biological autoluminescence", PLoS ONE. 14(7), e0214427 (2019) doi:10.1371/journal.pone.0214427

P. Marracino, D. Havelka, J. Průša, M. Liberti, J.A. Tuszyński, A.T. Ayoub, F. Apollonio and M. Cifra, "Tubulin response to intense nanosecond-scale electric field in molecular dynamics simulation", Scientific Reports. 9(1), 10477 (2019) doi:10.1038/s41598-019-46636-4

D. Chafai, V. Sulimenko, D. Havelka, L. Kubínová, P. Dráber and M. Cifra, "Reversible and Irreversible Modulation of Tubulin Self-Assembly by Intense Nanosecond Pulsed Electric Fields", Advanced Materials. 31(39), e1903636 (2019) doi:10.1002/adma.201903636

Publikace 2018

D. Chafai, I. Nemogová, P. Dráber and M. Cifra, "Zeta Potential of Cell Surface – Nanoenvironment Interaction Assessment", International Journal of Bioelectromagnetism. 20(1), 36-38 (2018)

C.M. Gallep, F.J. Viana, M. Cifra, D. Clarke and D. Robert, "Peter Barlow’s insights and contributions to the study of tidal gravity variations and ultra-weak light emissions in plants", Annals of Botany. 122(5), 757-766 (2018) doi:10.1093/aob/mcx176

V. Salari, Sh. Barzanjeh, M. Cifra, C. Simon, F. Scholkmann, Z. Alirezaei and J.A. Tuszyński, "Electromagnetic fields and optomechanics in cancer diagnostics and treatment", Frontiers in Bioscience. 23(8), 1391-1406 (2018) doi:10.2741/4651

B. Tian, S. Xu, J.A. Rogers, S. Cestellos-Blanco, Y. Yang, J.L. Carvalho-De-Souza, F. Bezanilla, J. Liu, Z. Bao, M. Hjort, Y. Cao, N. Melosh, G. Lanzani, F. Benfenati, G. Galli, F. Gygi, R. A. Kautz, A.A. Gorodetsky, S.S. Kim, T.K. Lu, P. Anikeeva, M. Cifra, O. Krivosudský, D. Havelka and Y. Jiang, "Roadmap on semiconductor–cell biointerfaces", Physical Biology. 15(9), 31002 (2018) doi:10.1088/1478-3975/aa9f34

H. Saeidfirozeh, A. Shafiekhani, M. Cifra and A.A. Masoudi, "Endogenous Chemiluminescence from Germinating Arabidopsis Thaliana Seeds", Scientific Reports. 8(1), 16231 (2018) doi:10.1038/s41598-018-34485-6

M. Cifra, J. Průša, D. Havelka and O. Krivosudský, "Water models in molecular dynamics simulation prediction of dielectric properties of biomaterials", IEEE Journal of Electromagnetics, RF and Microwaves in Medicine and Biology 3(2), 97-104 (2018) doi:10.1109/JERM.2018.2878379

A. Jha, Z. Akhter, N. Tiwari, K.T.M. Shafi, H. Samant, M.J. Akhtar and M. Cifra, "Broadband Wireless Sensing System for Non-Invasive Testing of Biological Samples", IEEE Journal on Emerging and Selected Topics in Circuits and Systems. 8(2), 251-259 (2018) doi:10.1109/JETCAS.2018.2829205

D. Havelka, O. Krivosudský, J. Průša and M. Cifra, "Rational design of sensor for broadband dielectric spectroscopy of biomolecules", Sensors and Actuators B - Chemical. 273(10 Nov), 62-69 (2018) doi:10.1016/j.snb.2018.05.124

J. Chumová, L. Trögelová, H. Kourová, J. Volc, V. Sulimenko, P. Halada, O. Kučera, O. Benada, A. Kuchařová, A. Klebanovych, P. Dráber, G. Daniel and P. Binarová, "gamma-Tubulin has a conserved intrinsic property of self-polymerization into double stranded filaments and fibrillar networks", Biochimica Et Biophysica Acta-Molecular Cell Research. 1865(5), 734-748 (2018) doi:10.1016/j.bbamcr.2018.02.009

Publikace 2017

O. Kučera, D. Havelka and M. Cifra, "Vibrations of microtubules: Physics that has not met biology yet", Wave Motion. 72(1 July), 13-22 (2017) doi:10.1016/j.wavemoti.2016.12.006

O. Krivosudský, P. Dráber and M. Cifra, "Resolving controversy of unusually high refractive index of a tubulin", EPL. 117(3), 38003 (2017) doi:10.1209/0295-5075/117/38003

R.C.R. Burgos, J.C. Schoeman, L.J. van Winden, K. Červinková, R. Ramautar, E.P.A. van Wijk, M. Cifra, R. Berger, T. Hankemeier and J. van der Greef, "Ultra-weak photon emission as a dynamic tool for monitoring oxidative stress metabolism", Scientific Reports. 7(1), 1229 (2017) doi:10.1038/s41598-017-01229-x

D. Havelka, M.A. Deriu, M. Cifra and O. Kučera, "Deformation pattern in vibrating microtubule: Structural mechanics study based on an atomistic approach", Scientific Reports. 7(1), 4227 (2017) doi:10.1038/s41598-017-04272-w

M. Poplová, P. Sovka and M. Cifra, "Poisson pre-processing of nonstationary photonic signals: Signals with equality between mean and variance", PLoS ONE. 12(12), e0188622 (2017) doi:10.1371/journal.pone.0188622

Sh. Barzanjeh, V. Salari, J. A. Tuszynski, M. Cifra and C. Simon, "Optomechanical proposal for monitoring microtubule mechanical vibrations", Physical Review E. 96(1), 12404 (2017) doi:10.1103/PhysRevE.96.012404

V. Procházka, M. Cifra, P. Kulha, T. Ižák, B. Rezek and A. Kromka, "Influence of non-adherent yeast cells on electrical characteristics of diamond-based field-effect transistors", Applied Surface Science. 395(Feb), 214-219 (2017) doi:10.1016/j.apsusc.2016.05.003

Publikace 2016

R.C.R. Burgos, K. Červinková, T. van der Laan, R. Ramautar, E.P.A. van Wijk, M. Cifra, S. Koval, R. Berger, T. Hankemeier and J. van der Greef, "Tracking biochemical changes correlated with ultra-weak photon emission using metabolomics", Journal of Photochemistry and Photobiology. B - Biology Section. -(163), 237-245 (2016) doi:10.1016/j.jphotobiol.2016.08.030

N. Rafieiolhosseini, M. Poplová, P. Sasanpour, H. Rafii-Tabar, M.R. Alhossaini and M. Cifra, "Photocount statistics of ultra-weak photon emission from germinating mung bean", Journal of Photochemistry and Photobiology. B - Biology Section. 162(Sep), 50-55 (2016) doi:10.1016/j.jphotobiol.2016.06.001

O. Krivosudský and M. Cifra, "Microwave absorption by nanoresonator vibrations tuned with surface modification", EPL. 115(4), 44003 (2016) doi:10.1209/0295-5075/115/44003

O. Kučera and M. Cifra, "Radiofrequency and microwave interactions between biomolecular systems", Journal of Biological Physics. 42(1), 45505 (2016) doi:10.1007/s10867-015-9392-1

Publikace 2015

M. Bereta, M. Cifra, K. Červinková, L. Janoušek and J. Barabas, "Hydroxyl radical induced ultra-weak photon emission from tyrosine solutions", Komunikácie. 17(4), 45476 (2015)

O. Kučera, K. Červinková, M. Nerudová and M. Cifra, "Spectral perspective on the electromagnetic activity of cells", Current Topics in Medicinal Chemistry. 15(6), 513-522 (2015)

M. Cifra, Ch. Brouder, M. Nerudová and O. Kučera, "Biophotons; coherence and photocount statistics: A critical review", Journal of Luminescence. 164(Aug), 38-51 (2015) doi:10.1016/j.jlumin.2015.03.020

Publikace 2014

C.M. Gallep, T.A. Moraes, K. Červinková, M. Cifra, M. Katsumata and P. W. Barlow, "Lunisolar tidal synchronism with biophoton emission during intercontinental wheat-seedling germination tests", Plant Signaling & Behavior. 9(3), e28671 (2014) doi:10.4161/psb.28671

D. Havelka, M. Cifra and O. Kučera, "Multi-mode electro-mechanical vibrations of a microtubule: In silico demonstration of electric pulse moving along a microtubule", Applied Physics Letters. 104(24), 243702 (2014) doi:10.1063/1.4884118

M. Cifra and P. Pospíšil, "Ultra-weak photon emission from biological samples: De?nition; mechanisms; properties; detection and applications", Journal of Photochemistry and Photobiology. B - Biology Section. 139(5 Oct), 45567 (2014) doi:10.1016/j.jphotobiol.2014.02.009

D. Havelka, O. Kučera, M.A. Deriu and M. Cifra, "Electro-Acoustic Behavior of the Mitotic Spindle: A Semi-Classical Coarse-Grained Model", PLoS ONE. 9(1), e86501 (2014) doi:10.1371/journal.pone.0086501

Publikace 2013

O. Kučera and M. Cifra, "Cell-to-cell signaling through light: just a ghost of chance?", Cell communication and signaling : CCS. 11(1), 87 (2013) doi:10.1186/1478-811X-11-87

F. Scholkmann, D. Fels and M. Cifra, "Non-chemical and non-contact cell-to-cell communication: a short review", AMERICAN JOURNAL OF TRANSLATIONAL RESEARCH. 5(6), 586-593 (2013)

Publikace 2012

O. Kučera and D. Havelka, "Mechano-electrical vibrations of microtubules-Link to subcellular morphology", Biosystems. 109(3), 346-355 (2012) doi:10.1016/j.biosystems.2012.04.009

M. Cifra, "Electrodynamic eigenmodes in cellular morphology", Biosystems. 109(3), 356-366 (2012) doi:10.1016/j.biosystems.2012.06.003

J. Pokorný, A. Jandová, M. Nedbalová, F. Jelínek, M. Cifra, O. Kučera, D. Havelka, J. Vrba, J. Vrba, A. Čoček and J. Kobilková, "Mitochondrial Metabolism – Neglected Link of CancerTransformation and Treatment", Prague Medical Report. 113(2), 81-94 (2012)

J. Pokorný, M. Cifra, A. Jandová, O. Kučera, F. Šrobár, J. Vrba, J. Vrba and J. Kobilková, "Targeting mitochondria for cancer treatment", European Journal of Oncology. 17(1), 23-36 (2012)

Publikace 2011

D. Havelka, M. Cifra, O. Kučera, J. Pokorný and J. Vrba, "High-frequency electric field and radiation characteristics of cellular microtubule network", Journal of Theoretical Biology. 286(7 Oct), 31-40 (2011) doi:10.1016/j.jtbi.2011.07.007

J. Pokorný, C. Vedruccio, M. Cifra and O. Kučera, "Cancer physics: diagnostics based on damped cellular elastoelectrical vibrations in microtubules", European Biophysics Journal With Biophysics Letters. 40(6), 747-759 (2011) doi:10.1007/s00249-011-0688-1

M. Cifra, J. S. Fields and A. Farhadi, "Electromagnetic cellular interactions", Progress in Biophysics & Molecular Biology. 105(3), 223-246 (2011) doi:10.1016/j.pbiomolbio.2010.07.003

M. Rahmana, J. A. Tuszynski, I. Bokkon, M. Cifra, P. Sardar and V. Salari, "Emission of mitochondrial biophotons and their effect on electrical activity of membrane via microtubules", Journal of Integrative Neuroscience. 10(1), 65-88 (2011) doi:10.1142/S0219635211002622

Publikace 2010

M. Cifra, J. Pokorný, D. Havelka and O. Kučera, "Electric field generated by axial longitudinal vibration modes of microtubule", Biosystems. 100(2), 122-131 (2010) doi:10.1016/j.biosystems.2010.02.007

O. Kučera, M. Cifra and J. Pokorný, "Technical aspects of measurement of cellular electromagnetic activity", European Biophysics Journal With Biophysics Letters. 39(10), 1465-1470 (2010) doi:10.1007/s00249-010-0597-8

Publikace 2009

A. Jandová, J. Pokorný, J. Kobilková, S. Trojan, M. Nedbalová, A. Dohnalová, A. Čoček, J. Mašata, J. Holaj, E. Tvrznická, P. Zvolský, M. Dvořáková and M. Cifra, "MITOCHONDRIAL DYSFUNCTION", Neural Network World. 19(4), 379-391 (2009)